dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004688_10|CGC1
Gene ID: MGYG000004688_00851
Location and strand information: 40844 - 44038 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004688_10|CGC1
Gene ID: MGYG000004688_00852
Location and strand information: 44096 - 44602 (-)
Family: GerE
Protein type: TF
Protein description: ECF RNA polymerase sigma factor SigL

Gene clsuter ID: MGYG000004688_10|CGC1
Gene ID: MGYG000004688_00853
Location and strand information: 44814 - 47606 (-)
Family: HTH_AraC
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004688_10|CGC1
Gene ID: MGYG000004688_00854
Location and strand information: 47740 - 48960 (-)
Family: GH88
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.8689
Protein molecular weight: 45068.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004688_10|CGC1
Gene ID: MGYG000004688_00855
Location and strand information: 48962 - 50812 (-)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 5.3501
Protein molecular weight: 70305.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is glycosaminoglycan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004688_00851	TonB-dependent receptor SusC	TC	40844	44038	-	1.B.14.6.1
MGYG000004688_00852	ECF RNA polymerase sigma factor SigL	TF	44096	44602	-	GerE
MGYG000004688_00853	hypothetical protein	TF	44814	47606	-	HTH_AraC
MGYG000004688_00854	hypothetical protein	CAZyme	47740	48960	-	GH88
MGYG000004688_00855	Retaining alpha-galactosidase	CAZyme	48962	50812	-	GH97
Protein ID	Protein Name	Type	Start	End	Strand	Signature